Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm4340L7N2C4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm4340L7N2C4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm4340L7N2C4 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm4340L7N2C4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4340L7N2C4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Gm7153-201ENSMUST00000117092 455 ntBASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.02■□□□□ 0.8
Gm4340L7N2C4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gm4340L7N2C4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm4340L7N2C4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm4340L7N2C4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm4340L7N2C4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.02■□□□□ 0.79
Gm4340L7N2C4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4340L7N2C4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms