Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm25745-201ENSMUST00000174945 133 ntBASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Gm5364-201ENSMUST00000216789 889 ntBASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
B020004C17RikJ3QP07 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
B020004C17RikJ3QP07 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
B020004C17RikJ3QP07 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
B020004C17RikJ3QP07 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
B020004C17RikJ3QP07 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
B020004C17RikJ3QP07 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm25990-201ENSMUST00000102440 86 ntBASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm4535-201ENSMUST00000182274 558 ntBASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm10355-201ENSMUST00000097146 517 ntBASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
B020004C17RikJ3QP07 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm7230-201ENSMUST00000173026 815 ntBASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
B020004C17RikJ3QP07 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms