Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sgo2bJ3QMK1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sgo2bJ3QMK1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sgo2bJ3QMK1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sgo2bJ3QMK1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sgo2bJ3QMK1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sgo2bJ3QMK1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sgo2bJ3QMK1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sgo2bJ3QMK1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sgo2bJ3QMK1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sgo2bJ3QMK1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms