Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm3727J3QM54 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.34□□□□□ -0.11
Gm3727J3QM54 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm3727J3QM54 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Gm3727J3QM54 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.33□□□□□ -0.11
Gm3727J3QM54 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gm3727J3QM54 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.33□□□□□ -0.12
Gm3727J3QM54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.33□□□□□ -0.12
Gm3727J3QM54 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.33□□□□□ -0.12
Gm3727J3QM54 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gm3727J3QM54 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3727J3QM54 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.32□□□□□ -0.12
Gm3727J3QM54 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.32□□□□□ -0.12
Gm3727J3QM54 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms