Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.26■□□□□ 0.35
Atf6F6VAN0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Atf6F6VAN0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.25■□□□□ 0.35
Atf6F6VAN0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Gm27463-201ENSMUST00000183569 57 ntBASIC17.25■□□□□ 0.35
Atf6F6VAN0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Atf6F6VAN0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.24■□□□□ 0.35
Atf6F6VAN0 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.24■□□□□ 0.35
Atf6F6VAN0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.24■□□□□ 0.35
Atf6F6VAN0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf6F6VAN0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Gm13216-201ENSMUST00000117145 591 ntBASIC17.23■□□□□ 0.35
Atf6F6VAN0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Gm37055-201ENSMUST00000191866 133 ntBASIC17.23■□□□□ 0.35
Atf6F6VAN0 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.23■□□□□ 0.35
Atf6F6VAN0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf6F6VAN0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf6F6VAN0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms