Protein–RNA interactions for Protein: F2Z3U3

Raph1, Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, mousemouse

Predictions only

Length 1,266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raph1F2Z3U3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Raph1F2Z3U3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Raph1F2Z3U3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Raph1F2Z3U3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Gm44549-201ENSMUST00000208351 577 ntBASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Raph1F2Z3U3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Flg-201ENSMUST00000050758 1488 ntBASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Raph1F2Z3U3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms