Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col6a3E9PWQ3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col6a3E9PWQ3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gm22175-201ENSMUST00000175007 78 ntBASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col6a3E9PWQ3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.78■□□□□ 0.28
Col6a3E9PWQ3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col6a3E9PWQ3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a3E9PWQ3 Gm7222-201ENSMUST00000117512 906 ntBASIC16.77■□□□□ 0.27
Col6a3E9PWQ3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Col6a3E9PWQ3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.77■□□□□ 0.27
Col6a3E9PWQ3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col6a3E9PWQ3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Gm12490-201ENSMUST00000120255 560 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Gm25745-201ENSMUST00000174945 133 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col6a3E9PWQ3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.75■□□□□ 0.27
Col6a3E9PWQ3 Gm44719-201ENSMUST00000206404 149 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms