Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm28043E0CXC2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm28043E0CXC2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm28043E0CXC2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm28043E0CXC2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm28043E0CXC2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Gm15378-201ENSMUST00000121894 207 ntBASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm28043E0CXC2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Gm10698-201ENSMUST00000182663 604 ntBASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.88■□□□□ 0.29
Gm28043E0CXC2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Gm42545-201ENSMUST00000202755 922 ntBASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm28043E0CXC2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm28043E0CXC2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms