Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Hfm1D3Z4R1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Gm9889-202ENSMUST00000206983 1577 ntBASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Hfm1D3Z4R1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Gm45203-201ENSMUST00000206384 1831 ntBASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 AC114585.2-202ENSMUST00000228094 426 ntBASIC23.59■■□□□ 1.37
Hfm1D3Z4R1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Hfm1D3Z4R1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Gm4459-201ENSMUST00000118750 468 ntBASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Gm45683-201ENSMUST00000210825 1247 ntBASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Hfm1D3Z4R1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Gm7063-201ENSMUST00000186840 981 ntBASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Hfm1D3Z4R1 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Hfm1D3Z4R1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC23.55■■□□□ 1.36
Hfm1D3Z4R1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Gm6184-201ENSMUST00000120403 1261 ntBASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Gm5828-201ENSMUST00000071842 1860 ntBASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Hfm1D3Z4R1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Hfm1D3Z4R1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms