Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5640A3KG49 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.1■□□□□ 0.33
Gm5640A3KG49 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5640A3KG49 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm5640A3KG49 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm5640A3KG49 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm5640A3KG49 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Gm5640A3KG49 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Gm5640A3KG49 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.07■□□□□ 0.32
Gm5640A3KG49 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm5640A3KG49 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm5640A3KG49 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm5640A3KG49 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms