Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.65□□□□□ -0.22
Chd6A3KFM7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.65□□□□□ -0.22
Chd6A3KFM7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Mir3102-201ENSMUST00000175555 104 ntBASIC13.64□□□□□ -0.23
Chd6A3KFM7 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.64□□□□□ -0.23
Chd6A3KFM7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.64□□□□□ -0.23
Chd6A3KFM7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Chd6A3KFM7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.63□□□□□ -0.23
Chd6A3KFM7 Mir3547-201ENSMUST00000175461 88 ntBASIC13.63□□□□□ -0.23
Chd6A3KFM7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.63□□□□□ -0.23
Chd6A3KFM7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Phf7-203ENSMUST00000226565 1971 ntBASIC13.62□□□□□ -0.23
Chd6A3KFM7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chd6A3KFM7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.61□□□□□ -0.23
Chd6A3KFM7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.61□□□□□ -0.23
Chd6A3KFM7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms