Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a4A2AX52 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.14□□□□□ -0.15
Col6a4A2AX52 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Col6a4A2AX52 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm15467-201ENSMUST00000120582 445 ntBASIC14.13□□□□□ -0.15
Col6a4A2AX52 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm2756-201ENSMUST00000195851 400 ntBASIC14.13□□□□□ -0.15
Col6a4A2AX52 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col6a4A2AX52 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Rprl3-201ENSMUST00000157400 290 ntBASIC14.12□□□□□ -0.15
Col6a4A2AX52 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col6a4A2AX52 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Gm6736-201ENSMUST00000166583 948 ntBASIC14.11□□□□□ -0.15
Col6a4A2AX52 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.11□□□□□ -0.15
Col6a4A2AX52 Mir5131-201ENSMUST00000175426 93 ntBASIC14.11□□□□□ -0.15
Col6a4A2AX52 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col6a4A2AX52 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Gm10060-201ENSMUST00000212002 111 ntBASIC14.1□□□□□ -0.15
Col6a4A2AX52 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.1□□□□□ -0.15
Col6a4A2AX52 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col6a4A2AX52 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms