Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IsxA1A546 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.7■□□□□ 0.1
IsxA1A546 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IsxA1A546 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
IsxA1A546 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.69■□□□□ 0.1
IsxA1A546 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.69■□□□□ 0.1
IsxA1A546 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IsxA1A546 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
IsxA1A546 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Gm13146-201ENSMUST00000118508 780 ntBASIC15.68■□□□□ 0.1
IsxA1A546 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.68■□□□□ 0.1
IsxA1A546 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
IsxA1A546 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.68■□□□□ 0.1
IsxA1A546 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IsxA1A546 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.67■□□□□ 0.1
IsxA1A546 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
IsxA1A546 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.67■□□□□ 0.1
IsxA1A546 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.67■□□□□ 0.1
IsxA1A546 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
IsxA1A546 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
IsxA1A546 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
IsxA1A546 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
IsxA1A546 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.66■□□□□ 0.1
IsxA1A546 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.66■□□□□ 0.1
IsxA1A546 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
IsxA1A546 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Reep4-203ENSMUST00000226563 1444 ntBASIC15.66■□□□□ 0.1
IsxA1A546 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.66■□□□□ 0.1
IsxA1A546 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
IsxA1A546 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms