Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Gm24841-201ENSMUST00000158676 357 ntBASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Gm27405-201ENSMUST00000184201 112 ntBASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav12d-1A0N8R0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Gm12896-201ENSMUST00000118430 226 ntBASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Gm17661-201ENSMUST00000170317 270 ntBASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Gm42545-201ENSMUST00000202755 922 ntBASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav12d-1A0N8R0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav12d-1A0N8R0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav12d-1A0N8R0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms