Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm9013-201ENSMUST00000132939 882 ntBASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mindy4b-psA0A1W2P7H6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm25016-201ENSMUST00000158399 131 ntBASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm37722-201ENSMUST00000193757 208 ntBASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm5587-201ENSMUST00000206270 674 ntBASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mindy4b-psA0A1W2P7H6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms