Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.35
Trbv17A0A140T8P8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv17A0A140T8P8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trbv17A0A140T8P8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trbv17A0A140T8P8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trbv17A0A140T8P8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms