Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Gm18669-201ENSMUST00000216049 778 ntBASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cfap99A0A140LIX9 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Cfap99A0A140LIX9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cfap99A0A140LIX9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cfap99A0A140LIX9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cfap99A0A140LIX9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Gm7153-201ENSMUST00000117092 455 ntBASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Gm26039-201ENSMUST00000158152 144 ntBASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cfap99A0A140LIX9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cfap99A0A140LIX9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms