Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhgb8A0A140LI48 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm715-201ENSMUST00000117865 831 ntBASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhgb8A0A140LI48 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgb8A0A140LI48 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhgb8A0A140LI48 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgb8A0A140LI48 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdhgb8A0A140LI48 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhgb8A0A140LI48 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Mir6982-201ENSMUST00000184354 68 ntBASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhgb8A0A140LI48 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Mtag2-201ENSMUST00000058665 714 ntBASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhgb8A0A140LI48 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm18025-201ENSMUST00000221733 862 ntBASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhgb8A0A140LI48 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhgb8A0A140LI48 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms