Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5580A0A0N4SVP8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Gm17661-201ENSMUST00000170317 270 ntBASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm5580A0A0N4SVP8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Gm37856-201ENSMUST00000191634 999 ntBASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm5580A0A0N4SVP8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm5580A0A0N4SVP8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Gm20760-201ENSMUST00000179197 648 ntBASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm5580A0A0N4SVP8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm5580A0A0N4SVP8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Gm37025-201ENSMUST00000195159 829 ntBASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Trmt13-210ENSMUST00000198454 880 ntBASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm5580A0A0N4SVP8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms