Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mir7071-201ENSMUST00000184847 69 ntBASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm29707-201ENSMUST00000196325 491 ntBASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv12-1A0A0B4J1H0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gm11355-201ENSMUST00000121120 306 ntBASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gm18421-201ENSMUST00000204122 625 ntBASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trbv12-1A0A0B4J1H0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms