Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv3A0A0A6YYE2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv3A0A0A6YYE2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trbv3A0A0A6YYE2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trbv3A0A0A6YYE2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trbv3A0A0A6YYE2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm44616-201ENSMUST00000206417 1732 ntBASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm13509-201ENSMUST00000119733 1308 ntBASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trbv3A0A0A6YYE2 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm45417-201ENSMUST00000209533 758 ntBASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Trbv3A0A0A6YYE2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trbv3A0A0A6YYE2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms