Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm10418-201ENSMUST00000100943 576 ntBASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav12d-3A0A075B6A4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm43060-201ENSMUST00000200621 289 ntBASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav12d-3A0A075B6A4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav12d-3A0A075B6A4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Trav12d-3A0A075B6A4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav12d-3A0A075B6A4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms