Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav5-4A0A075B652 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-4A0A075B652 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav5-4A0A075B652 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.08□□□□□ -0.15
Trav5-4A0A075B652 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav5-4A0A075B652 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav5-4A0A075B652 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav5-4A0A075B652 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Gm24841-201ENSMUST00000158676 357 ntBASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Dancr-204ENSMUST00000132389 2347 ntBASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav5-4A0A075B652 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav5-4A0A075B652 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms