Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav13-2A0A075B649 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Gm43272-201ENSMUST00000200599 1584 ntBASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-2A0A075B649 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13-2A0A075B649 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav13-2A0A075B649 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Zfp783-201ENSMUST00000095946 670 ntBASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-2A0A075B649 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 AV356131-201ENSMUST00000206201 750 ntBASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav13-2A0A075B649 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms