Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-1A0A075B606 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Gm16061-201ENSMUST00000122167 857 ntBASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Gm9731-201ENSMUST00000209480 747 ntBASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-1A0A075B606 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Idnk-204ENSMUST00000226010 1898 ntBASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Gm6659-201ENSMUST00000174752 547 ntBASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav13d-1A0A075B606 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13d-1A0A075B606 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.33□□□□□ -0.43
Trav13d-1A0A075B606 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm13474-201ENSMUST00000122466 815 ntBASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm22697-201ENSMUST00000175194 63 ntBASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13d-1A0A075B606 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13d-1A0A075B606 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms