Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Gm27405-201ENSMUST00000184201 112 ntBASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Gm29791-202ENSMUST00000207888 369 ntBASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Rab3c-203ENSMUST00000224180 967 ntBASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav6-6A0A075B603 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav6-6A0A075B603 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav6-6A0A075B603 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms