Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm14859-201ENSMUST00000117752 357 ntBASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav5-1A0A075B5Z7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav5-1A0A075B5Z7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav5-1A0A075B5Z7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trav5-1A0A075B5Z7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5-1A0A075B5Z7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm11950-201ENSMUST00000121615 838 ntBASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm6623-201ENSMUST00000173570 544 ntBASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm29518-201ENSMUST00000190858 372 ntBASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav5-1A0A075B5Z7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5-1A0A075B5Z7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms