Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CDY8P-201ENST00000428380 1279 ntBASIC6.87□□□□□ -1.31
MRE11P49959 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 MOB1AP2-201ENST00000446060 614 ntBASIC6.87□□□□□ -1.31
MRE11P49959 UBBP5-201ENST00000446970 266 ntBASIC6.87□□□□□ -1.31
MRE11P49959 CDY20P-201ENST00000447528 1279 ntBASIC6.87□□□□□ -1.31
MRE11P49959 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 AC104982.1-201ENST00000478775 574 ntBASIC6.87□□□□□ -1.31
MRE11P49959 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.87□□□□□ -1.31
MRE11P49959 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 AC093720.1-201ENST00000505681 714 ntBASIC6.87□□□□□ -1.31
MRE11P49959 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 OR7E10P-201ENST00000526420 991 ntBASIC6.87□□□□□ -1.31
MRE11P49959 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.87□□□□□ -1.31
MRE11P49959 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.87□□□□□ -1.31
MRE11P49959 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 TPRX1P1-201ENST00000557620 319 ntBASIC6.87□□□□□ -1.31
MRE11P49959 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 AC233266.2-201ENST00000567067 528 ntBASIC6.87□□□□□ -1.31
MRE11P49959 SNORD95-201ENST00000579879 68 ntBASIC6.87□□□□□ -1.31
MRE11P49959 MTCO2P2-201ENST00000591258 225 ntBASIC6.87□□□□□ -1.31
MRE11P49959 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
MRE11P49959 AC013444.2-201ENST00000603317 787 ntBASIC6.87□□□□□ -1.31
MRE11P49959 DUXAP3-201ENST00000603616 594 ntBASIC6.87□□□□□ -1.31
MRE11P49959 LSM1P2-201ENST00000604911 322 ntBASIC6.87□□□□□ -1.31
MRE11P49959 SNORD96A-201ENST00000606577 79 ntBASIC6.87□□□□□ -1.31
MRE11P49959 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.87□□□□□ -1.31
MRE11P49959 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 AC126544.2-201ENST00000625174 749 ntBASIC6.87□□□□□ -1.31
MRE11P49959 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.87□□□□□ -1.31
MRE11P49959 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
MRE11P49959 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.87□□□□□ -1.31
MRE11P49959 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.87□□□□□ -1.31
MRE11P49959 MTCO1P28-201ENST00000574177 1528 ntBASIC6.86□□□□□ -1.31
MRE11P49959 LINC02019-201ENST00000608605 2060 ntBASIC6.86□□□□□ -1.31
MRE11P49959 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MRE11P49959 AC020656.2-201ENST00000613291 5309 ntBASIC6.86□□□□□ -1.31
MRE11P49959 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MRE11P49959 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MRE11P49959 TAS2R15P-201ENST00000390674 928 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AL590635.1-201ENST00000406314 586 ntBASIC6.86□□□□□ -1.31
MRE11P49959 NACAP7-201ENST00000407371 609 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AL513325.1-201ENST00000417716 1034 ntBASIC6.86□□□□□ -1.31
MRE11P49959 ZNF885P-201ENST00000420174 1098 ntBASIC6.86□□□□□ -1.31
MRE11P49959 RCC2P2-201ENST00000422174 918 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 AC092647.3-201ENST00000443044 633 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.86□□□□□ -1.31
MRE11P49959 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MRE11P49959 CCDC11P1-201ENST00000503137 1162 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC021106.1-201ENST00000509020 1058 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 AC060775.1-201ENST00000518241 520 ntBASIC6.86□□□□□ -1.31
MRE11P49959 OR8G5-201ENST00000524943 1041 ntBASIC6.86□□□□□ -1.31
MRE11P49959 C1DP5-201ENST00000525775 383 ntBASIC6.86□□□□□ -1.31
MRE11P49959 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.86□□□□□ -1.31
MRE11P49959 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.86□□□□□ -1.31
MRE11P49959 AC079905.1-201ENST00000549280 475 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 AC007346.1-201ENST00000569208 867 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC008507.3-201ENST00000585753 472 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.86□□□□□ -1.31
MRE11P49959 NIFKP6-201ENST00000598115 845 ntBASIC6.86□□□□□ -1.31
MRE11P49959 OR51C1P-201ENST00000608504 942 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AL731566.2-201ENST00000618971 317 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC084824.4-201ENST00000620106 731 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC129778.1-202ENST00000623812 261 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AC073488.3-201ENST00000631611 778 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AL591379.1-207ENST00000635982 261 ntBASIC6.86□□□□□ -1.31
MRE11P49959 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.86□□□□□ -1.31
MRE11P49959 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
MRE11P49959 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.86□□□□□ -1.31
MRE11P49959 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 THAP12P8-201ENST00000447914 2115 ntBASIC6.85□□□□□ -1.31
MRE11P49959 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.85□□□□□ -1.31
MRE11P49959 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 THAP12P9-201ENST00000503971 2360 ntBASIC6.85□□□□□ -1.31
MRE11P49959 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 SNORA70.6-201ENST00000383934 134 ntBASIC6.85□□□□□ -1.31
MRE11P49959 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.85□□□□□ -1.31
MRE11P49959 CRIP1P1-201ENST00000427567 185 ntBASIC6.85□□□□□ -1.31
MRE11P49959 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.85□□□□□ -1.31
MRE11P49959 AL392003.1-201ENST00000434394 243 ntBASIC6.85□□□□□ -1.31
MRE11P49959 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
MRE11P49959 MTCYBP31-201ENST00000438855 1122 ntBASIC6.85□□□□□ -1.31
MRE11P49959 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms