Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA21-201ENST00000362423 132 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 RN7SKP15-201ENST00000364742 309 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 RN7SKP69-201ENST00000365390 305 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 RPL22P22-201ENST00000395439 379 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL391422.1-201ENST00000402155 436 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 BX664727.1-201ENST00000416024 466 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 RPL35AP31-201ENST00000418340 337 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 OR51A6P-201ENST00000418680 1004 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 TUBB4BP6-201ENST00000437576 479 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 GAPDHP14-201ENST00000450472 937 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC144530.1-201ENST00000452862 555 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 OR7E99P-201ENST00000505750 922 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 ST13P12-201ENST00000508958 1094 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 CYP4F27P-201ENST00000514557 494 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC027369.2-201ENST00000528030 440 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 RPA2P3-201ENST00000533268 770 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC020916.2-201ENST00000591242 360 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AP002884.5-201ENST00000595053 1132 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC069431.2-201ENST00000604149 1099 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC015982.1-201ENST00000608113 465 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC005021.1-201ENST00000608730 355 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AP001033.2-201ENST00000609701 1003 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC024884.1-201ENST00000620583 399 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AL356863.1-201ENST00000623378 1080 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 AC013437.2-201ENST00000639587 677 ntBASIC5.81□□□□□ -1.48
VPS50Q96JG6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VPS50Q96JG6 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VPS50Q96JG6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC019072.1-201ENST00000604535 1551 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 RN7SKP108-201ENST00000411367 328 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 TCEA1P2-201ENST00000420496 906 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 FO393414.1-201ENST00000428697 1184 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 USP24P1-201ENST00000433802 779 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 RPL23AP23-201ENST00000452590 471 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VPS50Q96JG6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC098583.1-201ENST00000480875 255 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 OR5H3P-201ENST00000502817 919 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC069306.1-201ENST00000507006 843 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC112518.2-201ENST00000508565 425 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 OR7E13P-201ENST00000526052 910 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC025918.2-201ENST00000558683 763 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC023825.1-201ENST00000566704 1030 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 MTATP6P24-201ENST00000576835 677 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.8□□□□□ -1.48
VPS50Q96JG6 AC011492.1-201ENST00000600023 315 ntBASIC5.8□□□□□ -1.48
VPS50Q96JG6 AL357094.1-201ENST00000603845 844 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms