Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 WDR95P-201ENST00000425638 1542 ntBASIC6.07□□□□□ -1.44
SLC6A4P31645 AP000547.3-204ENST00000588548 2523 ntBASIC6.07□□□□□ -1.44
SLC6A4P31645 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
SLC6A4P31645 HSPD1P11-201ENST00000508643 1702 ntBASIC6.07□□□□□ -1.44
SLC6A4P31645 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SLC6A4P31645 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC6A4P31645 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC6A4P31645 HSPD1P8-201ENST00000400121 1658 ntBASIC6.07□□□□□ -1.44
SLC6A4P31645 AC090220.1-201ENST00000593078 1699 ntBASIC6.07□□□□□ -1.44
SLC6A4P31645 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SLC6A4P31645 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC6A4P31645 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.07□□□□□ -1.44
SLC6A4P31645 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.07□□□□□ -1.44
SLC6A4P31645 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC130304.1-201ENST00000622942 2385 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC6A4P31645 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC6A4P31645 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 RNU6-481P-201ENST00000384194 107 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC6A4P31645 RNU6-796P-201ENST00000391086 107 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 OR7E101P-201ENST00000400428 513 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 MTND4P13-201ENST00000402078 1023 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 NPM1P37-201ENST00000403105 874 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 CDY17P-201ENST00000414121 1282 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL158825.1-201ENST00000414735 521 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 DEFB130D-201ENST00000426866 237 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC104843.2-201ENST00000427666 297 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AL138787.1-202ENST00000437804 898 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 SNRPFP2-201ENST00000440710 251 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 VN1R25P-201ENST00000443385 738 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC6A4P31645 PFN1P6-201ENST00000476786 399 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC010374.1-201ENST00000503762 1237 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC021146.7-201ENST00000509604 775 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC6A4P31645 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC106872.4-201ENST00000510050 523 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.06□□□□□ -1.44
SLC6A4P31645 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AL121839.1-201ENST00000556233 1185 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 AC008536.1-201ENST00000602872 669 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC113368.1-201ENST00000603736 382 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL139099.4-201ENST00000614802 114 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC018659.2-201ENST00000624690 715 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 HSPD1P7-201ENST00000447985 1686 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 AL359715.4-201ENST00000606629 1436 ntBASIC6.06□□□□□ -1.44
SLC6A4P31645 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC6A4P31645 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SLC6A4P31645 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SLC6A4P31645 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SLC6A4P31645 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SLC6A4P31645 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.05□□□□□ -1.44
SLC6A4P31645 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SLC6A4P31645 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms