Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 RPS29P22-201ENST00000472363 168 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 AC092754.1-201ENST00000472975 479 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 AC083982.1-201ENST00000485679 344 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 AC110775.1-201ENST00000513721 462 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.16□□□□□ -1.42
CCNA1P78396 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 AC122688.1-201ENST00000541494 223 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.16□□□□□ -1.42
CCNA1P78396 EIF3FP1-201ENST00000613970 806 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.16□□□□□ -1.42
CCNA1P78396 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.16□□□□□ -1.42
CCNA1P78396 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 AL078621.3-201ENST00000623707 2042 ntBASIC6.16□□□□□ -1.42
CCNA1P78396 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.16□□□□□ -1.42
CCNA1P78396 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.15□□□□□ -1.42
CCNA1P78396 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.15□□□□□ -1.42
CCNA1P78396 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 AC068870.1-201ENST00000563737 2455 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
CCNA1P78396 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.15□□□□□ -1.42
CCNA1P78396 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
CCNA1P78396 RPL23AP18-201ENST00000416139 468 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 OR10T1P-201ENST00000424327 947 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.15□□□□□ -1.42
CCNA1P78396 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 RN7SL188P-201ENST00000469842 285 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 AC007686.1-201ENST00000488511 463 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 OR8G3P-201ENST00000533406 921 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.15□□□□□ -1.42
CCNA1P78396 FAM25E-202ENST00000608562 189 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 AL352984.2-202ENST00000613699 155 ntBASIC6.15□□□□□ -1.42
CCNA1P78396 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.15□□□□□ -1.42
CCNA1P78396 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.15□□□□□ -1.42
CCNA1P78396 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
CCNA1P78396 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCNA1P78396 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCNA1P78396 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.15□□□□□ -1.43
CCNA1P78396 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCNA1P78396 AC083837.1-201ENST00000565297 2994 ntBASIC6.15□□□□□ -1.43
CCNA1P78396 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
CCNA1P78396 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
CCNA1P78396 MTCO1P7-201ENST00000419523 1542 ntBASIC6.15□□□□□ -1.43
CCNA1P78396 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.15□□□□□ -1.43
CCNA1P78396 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.15□□□□□ -1.43
CCNA1P78396 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCNA1P78396 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
CCNA1P78396 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCNA1P78396 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCNA1P78396 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
CCNA1P78396 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CCNA1P78396 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.14□□□□□ -1.43
CCNA1P78396 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.14□□□□□ -1.43
CCNA1P78396 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.14□□□□□ -1.43
CCNA1P78396 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.14□□□□□ -1.43
CCNA1P78396 SNORD125-201ENST00000459538 96 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 RPS3AP41-201ENST00000462701 778 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 RN7SL860P-201ENST00000473738 223 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 RNA5SP373-201ENST00000517271 95 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 EDDM3DP-201ENST00000554692 434 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.14□□□□□ -1.43
CCNA1P78396 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.14□□□□□ -1.43
CCNA1P78396 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.14□□□□□ -1.43
CCNA1P78396 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.14□□□□□ -1.43
CCNA1P78396 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.14□□□□□ -1.43
CCNA1P78396 AC005252.1-201ENST00000604518 1063 ntBASIC6.14□□□□□ -1.43
CCNA1P78396 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
CCNA1P78396 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.14□□□□□ -1.43
CCNA1P78396 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms