Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 RAD1P2-201ENST00000446414 663 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AL035090.1-201ENST00000454835 332 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC104849.1-201ENST00000462623 405 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC079841.1-201ENST00000481228 950 ntBASIC5.72□□□□□ -1.49
LHX1P48742 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 AC008638.1-201ENST00000506035 866 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 HIGD1AP14-201ENST00000507617 282 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC093815.1-201ENST00000508637 280 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.72□□□□□ -1.49
LHX1P48742 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.72□□□□□ -1.49
LHX1P48742 SCARNA20.4-201ENST00000516969 131 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 OR5D2P-201ENST00000524390 911 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC079064.1-201ENST00000528365 362 ntBASIC5.72□□□□□ -1.49
LHX1P48742 YWHABP2-201ENST00000540201 713 ntBASIC5.72□□□□□ -1.49
LHX1P48742 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.72□□□□□ -1.49
LHX1P48742 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.72□□□□□ -1.49
LHX1P48742 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 AC025857.2-201ENST00000602711 238 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC069307.1-201ENST00000602820 447 ntBASIC5.72□□□□□ -1.49
LHX1P48742 AC100814.1-201ENST00000606963 623 ntBASIC5.72□□□□□ -1.49
LHX1P48742 SDR42E1P1-201ENST00000611327 477 ntBASIC5.72□□□□□ -1.49
LHX1P48742 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LHX1P48742 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX1P48742 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX1P48742 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
LHX1P48742 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LHX1P48742 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
LHX1P48742 AC018628.1-201ENST00000624147 3819 ntBASIC5.71□□□□□ -1.49
LHX1P48742 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.71□□□□□ -1.49
LHX1P48742 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.71□□□□□ -1.5
LHX1P48742 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.5
LHX1P48742 CUL4AP1-201ENST00000514750 1863 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 PPIAP9-201ENST00000403866 498 ntBASIC5.71□□□□□ -1.5
LHX1P48742 OR4K12P-201ENST00000406538 961 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.71□□□□□ -1.5
LHX1P48742 AL627308.1-201ENST00000435693 821 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.71□□□□□ -1.5
LHX1P48742 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.71□□□□□ -1.5
LHX1P48742 NPM1P19-201ENST00000450070 712 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AC110749.1-201ENST00000462007 357 ntBASIC5.71□□□□□ -1.5
LHX1P48742 RN7SL799P-201ENST00000475891 298 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AC072052.1-201ENST00000496556 306 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.71□□□□□ -1.5
LHX1P48742 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 AC006499.3-201ENST00000506077 748 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.71□□□□□ -1.5
LHX1P48742 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.71□□□□□ -1.5
LHX1P48742 AP000619.2-201ENST00000546014 969 ntBASIC5.71□□□□□ -1.5
LHX1P48742 NPM1P45-201ENST00000583151 559 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AC005252.1-201ENST00000604518 1063 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AL133406.3-201ENST00000606817 541 ntBASIC5.71□□□□□ -1.5
LHX1P48742 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.71□□□□□ -1.5
LHX1P48742 AP001153.1-201ENST00000641024 338 ntBASIC5.71□□□□□ -1.5
LHX1P48742 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
LHX1P48742 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.71□□□□□ -1.5
LHX1P48742 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
LHX1P48742 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX1P48742 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LHX1P48742 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LHX1P48742 AC100757.1-201ENST00000616872 1835 ntBASIC5.7□□□□□ -1.5
LHX1P48742 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LHX1P48742 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LHX1P48742 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LHX1P48742 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LHX1P48742 RNU4-34P-201ENST00000410431 124 ntBASIC5.7□□□□□ -1.5
LHX1P48742 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 AL139148.1-201ENST00000427122 680 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC138761.5-201ENST00000433967 325 ntBASIC5.7□□□□□ -1.5
LHX1P48742 XKRYP6-201ENST00000440468 1116 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC245047.2-201ENST00000441060 530 ntBASIC5.7□□□□□ -1.5
LHX1P48742 XKRYP3-201ENST00000442113 1116 ntBASIC5.7□□□□□ -1.5
LHX1P48742 RN7SL197P-201ENST00000466981 299 ntBASIC5.7□□□□□ -1.5
LHX1P48742 RN7SL423P-201ENST00000486202 304 ntBASIC5.7□□□□□ -1.5
LHX1P48742 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.7□□□□□ -1.5
LHX1P48742 RNA5SP92-201ENST00000516437 110 ntBASIC5.7□□□□□ -1.5
LHX1P48742 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.7□□□□□ -1.5
LHX1P48742 OR10G5P-201ENST00000532733 358 ntBASIC5.7□□□□□ -1.5
LHX1P48742 OR8G3P-201ENST00000533406 921 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms