Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 RNU6-252P-201ENST00000363232 107 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 RNU6-452P-201ENST00000384406 107 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 MIR1275-201ENST00000408770 80 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL354890.1-201ENST00000413730 346 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL158827.1-201ENST00000416300 391 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 PNKDP1-201ENST00000435914 430 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ATP5LP2-201ENST00000440646 311 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 FHP1-201ENST00000442741 703 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 TIMM8BP2-201ENST00000445940 251 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC005077.1-201ENST00000449226 375 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL354710.1-201ENST00000453641 246 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC091874.2-201ENST00000505889 720 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 SNORA31.13-201ENST00000516624 135 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC126615.2-201ENST00000553003 515 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC022884.3-201ENST00000579571 248 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 DHFRP1-201ENST00000579682 559 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC098483.2-201ENST00000603158 454 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC093388.1-201ENST00000609166 430 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC092266.1-201ENST00000610958 165 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL139099.4-201ENST00000614802 114 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AP002371.2-201ENST00000624450 503 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 CCT8P1-201ENST00000413611 1657 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 AL158152.1-201ENST00000602652 1435 ntBASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LINC00346Q8IVM7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC087516.1-201ENST00000561236 2428 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 RNA5SP91-201ENST00000390902 119 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 HMGB1P13-201ENST00000406019 642 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 METTL15P3-201ENST00000415522 1221 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC009963.3-201ENST00000458090 486 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 RPS20P4-201ENST00000461659 355 ntBASIC5.13□□□□□ -1.59
LINC00346Q8IVM7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms