Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ARAFP2-201ENST00000440565 559 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL163193.1-201ENST00000444895 788 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL606490.1-201ENST00000452266 765 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 RPL12P39-201ENST00000455456 496 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 RPL35AP19-201ENST00000469425 329 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC100832.1-201ENST00000471945 383 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 OR2AO1P-201ENST00000476497 403 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 RPS3AP15-201ENST00000483874 781 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 PDCL3P4-201ENST00000489621 720 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 RN7SL547P-201ENST00000490793 290 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC097486.1-201ENST00000515331 210 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AP001804.2-201ENST00000533932 910 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC015720.2-201ENST00000567709 334 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC060780.2-201ENST00000589047 198 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC009303.3-201ENST00000591103 736 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AP002884.5-201ENST00000595053 1132 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 HIRAP1-201ENST00000605318 787 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL159169.2-201ENST00000610061 1269 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC007204.2-201ENST00000615022 616 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AC005840.5-201ENST00000619166 599 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL022311.1-201ENST00000623726 19416 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NPIPA2E9PIF3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 RNA5SP319-201ENST00000362768 119 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AL672167.2-201ENST00000377164 879 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 RN7SKP17-201ENST00000411242 351 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AP000534.2-201ENST00000412729 568 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 RPS6P23-201ENST00000413224 722 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC016769.2-201ENST00000414815 475 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 RANP1-206ENST00000455094 651 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 snoU13.29-201ENST00000459370 104 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 RN7SL51P-201ENST00000468230 285 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC073610.1-201ENST00000489971 396 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 DUTP1-201ENST00000493631 470 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ST13P12-201ENST00000508958 1094 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 NRBF2P4-201ENST00000520874 850 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MIR1269B-201ENST00000580405 75 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MIR4443-201ENST00000585052 53 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AC138473.1-201ENST00000605717 526 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MTCO1P1-201ENST00000624263 1081 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 AL078621.3-201ENST00000623707 2042 ntBASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPIPA2E9PIF3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
NPIPA2E9PIF3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms