Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SNORA64.1-201ENST00000362600 132 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 RN7SKP15-201ENST00000364742 309 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 EIF2S2P3-201ENST00000428356 999 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 RPL7AP49-201ENST00000429522 581 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AL591438.1-201ENST00000433508 581 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 ZFAND6P1-201ENST00000434138 605 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 NDUFS5P5-201ENST00000437256 321 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 RN7SL583P-201ENST00000475692 287 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC098976.1-201ENST00000513014 541 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC092709.1-201ENST00000521355 1045 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 OR10D4P-201ENST00000525892 951 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 OR7E10P-201ENST00000526420 991 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC027369.2-201ENST00000528030 440 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AL359219.2-201ENST00000555184 348 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 CYCSP38-201ENST00000559840 322 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC010503.3-201ENST00000594355 540 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AP002371.2-201ENST00000624450 503 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AC080188.3-201ENST00000624842 748 ntBASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SLC44A1Q8WWI5 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AL603750.1-201ENST00000624216 1717 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 RNA5SP273-201ENST00000362484 113 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 OR1F12-201ENST00000402365 945 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 HSPD1P12-201ENST00000429127 1069 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC006335.2-201ENST00000437993 330 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC016772.1-201ENST00000444170 1261 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 OR52E3P-201ENST00000452083 936 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AP000797.2-201ENST00000475768 606 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 IGBP1P4-201ENST00000503202 879 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 SCARNA20.4-201ENST00000516969 131 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC027026.1-201ENST00000532323 742 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC079905.1-201ENST00000549280 475 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 NMNAT1P5-201ENST00000559657 841 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC073869.7-201ENST00000640874 297 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC003973.3-201ENST00000624863 2822 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC019072.1-201ENST00000604535 1551 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.55□□□□□ -1.52
SLC44A1Q8WWI5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 SNORA48.4-201ENST00000391089 134 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms