Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AC104964.3-201ENST00000606115 2860 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.47□□□□□ -1.37
RFX7Q2KHR2 AC140134.1-201ENST00000511830 3544 ntBASIC6.47□□□□□ -1.37
RFX7Q2KHR2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 U3.36-201ENST00000408418 213 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 Y_RNA.625-201ENST00000411256 107 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 FAM96AP1-201ENST00000430879 482 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC022360.1-201ENST00000521058 340 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 OR5D15P-201ENST00000531671 942 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 RN7SL290P-201ENST00000578661 300 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC087763.1-201ENST00000603391 286 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC009027.1-201ENST00000604510 479 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 MIR6839-201ENST00000620425 113 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 AC099654.6-201ENST00000636487 512 ntBASIC6.46□□□□□ -1.37
RFX7Q2KHR2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.46□□□□□ -1.37
RFX7Q2KHR2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFX7Q2KHR2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 RPS27P18-201ENST00000431701 247 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 GAPDHP14-201ENST00000450472 937 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC058823.1-201ENST00000485315 474 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 MTCYBP13-201ENST00000578634 1093 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC006116.3-201ENST00000592968 361 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC008814.1-201ENST00000603797 406 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 MIR6748-201ENST00000610433 71 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 AC023421.1-201ENST00000590535 1785 ntBASIC6.45□□□□□ -1.38
RFX7Q2KHR2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RFX7Q2KHR2 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 MIR585-201ENST00000384887 94 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 RNA5SP241-201ENST00000391326 114 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 RPL19P16-201ENST00000433839 588 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AC090018.1-201ENST00000434369 367 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 RPL7P61-201ENST00000451721 751 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 CBX1P2-201ENST00000453841 458 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 DNAJB5P1-201ENST00000454004 806 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 RPL35AP28-201ENST00000459730 331 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AC090114.3-201ENST00000479267 829 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 SNRPCP2-201ENST00000504370 475 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AC021193.1-201ENST00000511607 420 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 AL031658.2-201ENST00000616850 651 ntBASIC6.44□□□□□ -1.38
RFX7Q2KHR2 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
RFX7Q2KHR2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms