Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC4P09017 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC4P09017 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 RN7SKP273-201ENST00000411392 314 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 UBE2V2P4-201ENST00000447495 259 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC4P09017 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC015864.1-201ENST00000496512 544 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 RPS4XP20-201ENST00000505751 772 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 RNA5SP373-201ENST00000517271 95 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC4P09017 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC051619.2-201ENST00000559063 397 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 NMNAT1P5-201ENST00000559657 841 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 AP001357.1-201ENST00000586304 1053 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXC4P09017 AC005252.1-201ENST00000604518 1063 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 AC037198.3-201ENST00000616754 526 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXC4P09017 AL078621.3-201ENST00000623707 2042 ntBASIC5.3□□□□□ -1.56
HOXC4P09017 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXC4P09017 AL137058.3-201ENST00000624531 3099 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
HOXC4P09017 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC4P09017 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 AC109780.1-201ENST00000451768 1344 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HOXC4P09017 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXC4P09017 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC4P09017 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 SNORD56.6-201ENST00000384569 71 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC4P09017 DPPA2P3-201ENST00000411853 655 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC4P09017 FAR2P1-206ENST00000449736 709 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 AC079168.1-201ENST00000458741 345 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 DEFB109A-201ENST00000482450 265 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 RN7SL423P-201ENST00000486202 304 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC4P09017 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXC4P09017 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
HOXC4P09017 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC4P09017 OR11H3P-201ENST00000554547 982 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC4P09017 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXC4P09017 AC135068.5-201ENST00000624197 983 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC4P09017 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HOXC4P09017 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC4P09017 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXC4P09017 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXC4P09017 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
HOXC4P09017 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 AC011493.1-201ENST00000596753 1632 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 SNORA17.1-201ENST00000362945 126 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
HOXC4P09017 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 OR4K12P-201ENST00000406538 961 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 RPL23AP27-201ENST00000415161 451 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC4P09017 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 NDUFB4P8-201ENST00000435351 367 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC4P09017 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC4P09017 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC4P09017 RNU6-964P-201ENST00000516524 69 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 SCARNA20.4-201ENST00000516969 131 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 OR8Q1P-201ENST00000526467 655 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 GTF2IP11-201ENST00000526931 420 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms