Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC126365.2-201ENST00000580630 379 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC063977.5-201ENST00000601044 974 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 HIRAP1-201ENST00000605318 787 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 NANOGP3-201ENST00000605855 286 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC084036.1-201ENST00000609190 508 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 PCA3_2.1-201ENST00000612507 409 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC090607.5-201ENST00000615692 224 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AC027279.4-201ENST00000624371 2072 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 AL034546.1-201ENST00000623740 3693 ntBASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.77□□□□□ -1.49
RAI2Q9Y5P3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AP001002.1-201ENST00000625148 1513 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 RAB28P1-201ENST00000411517 641 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 RBMY2KP-201ENST00000418221 992 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 OR5W1P-201ENST00000423705 938 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC017019.1-201ENST00000426129 261 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AL590399.2-201ENST00000427536 309 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 CFL1P1-202ENST00000432948 411 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC091153.1-201ENST00000466297 402 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 TRBV8-1-201ENST00000481590 279 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC004815.1-201ENST00000484185 331 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 RPS7P6-201ENST00000485777 579 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 PDCL3P4-201ENST00000489621 720 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 OR7E157P-201ENST00000494376 911 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC025768.1-201ENST00000510057 267 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC060780.2-201ENST00000589047 198 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC011458.1-201ENST00000604034 617 ntBASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RAI2Q9Y5P3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 MRE11P1-201ENST00000464884 2127 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 RNU6-1176P-201ENST00000390955 107 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 RMRPP5-201ENST00000411156 267 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 METTL15P3-201ENST00000415522 1221 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 NENFP1-201ENST00000419476 466 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 NME1P1-201ENST00000420914 382 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 AL606490.1-201ENST00000452266 765 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 COPS8P2-201ENST00000473228 627 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 RN7SL727P-201ENST00000482164 296 ntBASIC5.75□□□□□ -1.49
RAI2Q9Y5P3 RN7SL184P-201ENST00000488308 297 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms