Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 RPL7P58-201ENST00000402913 758 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 RNA5SP487-201ENST00000410186 122 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 BX276092.6-201ENST00000430476 250 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AL359265.1-201ENST00000440296 795 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 BX276092.8-201ENST00000455722 250 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC104849.1-201ENST00000462623 405 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC058823.1-201ENST00000485315 474 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 SEPT10P1-201ENST00000517342 1162 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 MIR4420-201ENST00000583944 77 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 SNORA35B-201ENST00000607417 129 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 NF1P10-201ENST00000613227 742 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC003973.3-201ENST00000624863 2822 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 AC235565.1-201ENST00000456962 1325 ntBASIC5.45□□□□□ -1.54
LHX3Q9UBR4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LHX3Q9UBR4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 RN7SKP145-201ENST00000363291 303 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 GTF3AP1-201ENST00000416942 1004 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 BX510359.3-201ENST00000422168 306 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC023271.1-201ENST00000445936 1090 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 RN7SL197P-201ENST00000466981 299 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 RPL7P6-201ENST00000480903 738 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 NPM1P21-201ENST00000513394 762 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 SNORD116-30-201ENST00000516468 85 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 RNA5SP373-201ENST00000517271 95 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 IGKV2-19-201ENST00000518132 283 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 YWHABP2-201ENST00000540201 713 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 MTND2P17-201ENST00000550281 688 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 NMNAT1P5-201ENST00000559657 841 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC108738.1-201ENST00000603703 237 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AL356752.1-201ENST00000615844 593 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 WBP1LP8-201ENST00000617401 327 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 uc_338.7-201ENST00000621834 124 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC016745.2-201ENST00000608834 3443 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 AC012078.1-201ENST00000405035 1646 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.44□□□□□ -1.54
LHX3Q9UBR4 OR55B1P-203ENST00000641518 2602 ntBASIC5.44□□□□□ -1.54
LHX3Q9UBR4 MAPK10-261ENST00000641050 3109 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 RNU1-149P-201ENST00000390870 161 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 MIR1286-201ENST00000408112 78 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AL158827.1-201ENST00000416300 391 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AL354868.1-201ENST00000417077 482 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AL355433.1-201ENST00000422804 300 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AC108075.1-201ENST00000424692 529 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 MRPS21P3-201ENST00000436696 262 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AC104634.1-201ENST00000452720 462 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 OR2AO1P-201ENST00000476497 403 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 GOLGA5P1-201ENST00000507317 980 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.43□□□□□ -1.54
LHX3Q9UBR4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LHX3Q9UBR4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms