Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC015982.1-201ENST00000608113 465 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 AC104623.2-202ENST00000623477 4002 ntBASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAPPC4Q9Y296 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 MT-RNR2-201ENST00000387347 1559 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 EI24P3-201ENST00000399046 1062 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 RIMKLBP2-201ENST00000424737 654 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC006335.2-201ENST00000437993 330 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC073909.1-201ENST00000447112 999 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 RPL31P15-201ENST00000449770 338 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC144530.1-201ENST00000452862 555 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 RPS27AP2-201ENST00000457576 465 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 RN7SL188P-201ENST00000469842 285 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 GOLGA5P1-201ENST00000507317 980 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC109481.1-201ENST00000509173 282 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 TRIM51DP-201ENST00000529746 596 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC122688.1-201ENST00000541494 223 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC127024.6-201ENST00000621598 424 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 SRRM1P3-201ENST00000426911 2678 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 YES1P1-201ENST00000418510 1628 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC079097.1-201ENST00000512187 1399 ntBASIC5.04□□□□□ -1.6
TRAPPC4Q9Y296 AC068870.3-201ENST00000625077 2536 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC093849.1-201ENST00000563631 2209 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 RNA5SP122-201ENST00000384457 108 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MIR551A-201ENST00000385042 96 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 SNORA48.4-201ENST00000391089 134 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 CDY17P-201ENST00000414121 1282 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 VN1R3-201ENST00000418822 919 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MGAT2P2-201ENST00000427194 797 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC064862.4-201ENST00000442180 334 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 PRPF38AP1-201ENST00000451976 933 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MYL12BP2-201ENST00000503948 512 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AL049872.1-201ENST00000556323 322 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC135626.1-201ENST00000556983 435 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC007066.2-202ENST00000566531 914 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 MTCYBP13-201ENST00000578634 1093 ntBASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAPPC4Q9Y296 AP005262.1-201ENST00000582646 997 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms