Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.56□□□□□ -1.52
CBX1P83916 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.56□□□□□ -1.52
CBX1P83916 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.56□□□□□ -1.52
CBX1P83916 AC009244.1-201ENST00000450566 258 ntBASIC5.56□□□□□ -1.52
CBX1P83916 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.56□□□□□ -1.52
CBX1P83916 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.56□□□□□ -1.52
CBX1P83916 AP002371.1-201ENST00000463604 433 ntBASIC5.56□□□□□ -1.52
CBX1P83916 RPS7P10-201ENST00000464254 603 ntBASIC5.56□□□□□ -1.52
CBX1P83916 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.56□□□□□ -1.52
CBX1P83916 RN7SL413P-201ENST00000482700 297 ntBASIC5.56□□□□□ -1.52
CBX1P83916 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.56□□□□□ -1.52
CBX1P83916 AC018639.1-201ENST00000492994 442 ntBASIC5.56□□□□□ -1.52
CBX1P83916 RNU6-943P-201ENST00000516960 98 ntBASIC5.56□□□□□ -1.52
CBX1P83916 HNRNPRP2-201ENST00000528421 743 ntBASIC5.56□□□□□ -1.52
CBX1P83916 AC244107.2-201ENST00000611773 76 ntBASIC5.56□□□□□ -1.52
CBX1P83916 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.56□□□□□ -1.52
CBX1P83916 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CBX1P83916 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
CBX1P83916 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CBX1P83916 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CBX1P83916 NEPNP-201ENST00000404786 1371 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC009220.2-201ENST00000489759 1751 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC093909.5-201ENST00000621839 1799 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CBX1P83916 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CBX1P83916 AC010894.1-201ENST00000313760 361 ntBASIC5.55□□□□□ -1.52
CBX1P83916 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CBX1P83916 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.55□□□□□ -1.52
CBX1P83916 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 SNORD96B-201ENST00000386148 79 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC026310.1-201ENST00000396004 378 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC007068.1-201ENST00000396690 844 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AL353133.1-201ENST00000407695 401 ntBASIC5.55□□□□□ -1.52
CBX1P83916 RNA5SP146-201ENST00000410743 123 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.55□□□□□ -1.52
CBX1P83916 AC013429.2-201ENST00000418798 781 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.55□□□□□ -1.52
CBX1P83916 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.55□□□□□ -1.52
CBX1P83916 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.55□□□□□ -1.52
CBX1P83916 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.55□□□□□ -1.52
CBX1P83916 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.55□□□□□ -1.52
CBX1P83916 MRPL35P2-201ENST00000448009 511 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.55□□□□□ -1.52
CBX1P83916 AC090686.1-201ENST00000481577 749 ntBASIC5.55□□□□□ -1.52
CBX1P83916 GM2AP2-201ENST00000491764 562 ntBASIC5.55□□□□□ -1.52
CBX1P83916 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.55□□□□□ -1.52
CBX1P83916 AC027308.1-201ENST00000517993 110 ntBASIC5.55□□□□□ -1.52
CBX1P83916 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.55□□□□□ -1.52
CBX1P83916 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.55□□□□□ -1.52
CBX1P83916 AC022960.2-201ENST00000616300 666 ntBASIC5.55□□□□□ -1.52
CBX1P83916 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CBX1P83916 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CBX1P83916 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CBX1P83916 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CBX1P83916 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CBX1P83916 NAMPTP1-201ENST00000440465 2514 ntBASIC5.54□□□□□ -1.52
CBX1P83916 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CBX1P83916 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 AC068254.2-201ENST00000623938 3577 ntBASIC5.54□□□□□ -1.52
CBX1P83916 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CBX1P83916 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 BMS1P3-201ENST00000372011 932 ntBASIC5.54□□□□□ -1.52
CBX1P83916 SNORA7A-201ENST00000384765 139 ntBASIC5.54□□□□□ -1.52
CBX1P83916 AL589994.1-201ENST00000404962 340 ntBASIC5.54□□□□□ -1.52
CBX1P83916 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 FABP7P1-201ENST00000424004 391 ntBASIC5.54□□□□□ -1.52
CBX1P83916 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 AC125612.1-201ENST00000547580 377 ntBASIC5.54□□□□□ -1.52
CBX1P83916 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.54□□□□□ -1.52
CBX1P83916 AC234775.3-201ENST00000564612 656 ntBASIC5.54□□□□□ -1.52
CBX1P83916 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.54□□□□□ -1.52
CBX1P83916 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.54□□□□□ -1.52
CBX1P83916 AP000769.2-201ENST00000602344 396 ntBASIC5.54□□□□□ -1.52
CBX1P83916 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.54□□□□□ -1.52
CBX1P83916 IMMP1LP1-201ENST00000605170 488 ntBASIC5.54□□□□□ -1.52
CBX1P83916 AL021918.2-201ENST00000613415 194 ntBASIC5.54□□□□□ -1.52
CBX1P83916 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
CBX1P83916 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CBX1P83916 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CBX1P83916 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CBX1P83916 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms