Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC021766.1-201ENST00000624404 741 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 OR6C71P-202ENST00000641886 1107 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 YES1P1-201ENST00000418510 1628 ntBASIC5.99□□□□□ -1.45
EBF3Q9H4W6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
EBF3Q9H4W6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC024341.1-201ENST00000526444 1552 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ADAM24P-201ENST00000398655 2101 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 MIR133A2-201ENST00000347538 102 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 RNA5SP453-201ENST00000362503 119 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL391422.1-201ENST00000402155 436 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL357752.1-201ENST00000412817 349 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 RAD1P2-201ENST00000446414 663 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 FRG2FP-204ENST00000453982 852 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC025181.1-201ENST00000477507 416 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC009120.1-201ENST00000493458 473 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ST13P12-201ENST00000508958 1094 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC010374.2-201ENST00000512933 535 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SNORD116-30-201ENST00000516468 85 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 RNU4-18P-201ENST00000516751 149 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 MRPS16P1-201ENST00000523462 412 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AP000619.2-201ENST00000546014 969 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL390318.1-201ENST00000624564 687 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC008993.2-201ENST00000631744 806 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC114786.1-201ENST00000512892 1415 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AC004656.1-201ENST00000568479 4951 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
EBF3Q9H4W6 AL161912.4-201ENST00000623889 2468 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 THAP12P9-201ENST00000503971 2360 ntBASIC5.98□□□□□ -1.45
EBF3Q9H4W6 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 GTF2IP4-201ENST00000453092 2054 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AL354692.1-201ENST00000423044 315 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 NPM1P25-201ENST00000429734 854 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 CFL1P1-202ENST00000432948 411 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AL390119.1-201ENST00000440329 312 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 OSTCP1-201ENST00000455507 450 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 RN7SL515P-201ENST00000463999 297 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 BX510359.5-201ENST00000515651 304 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 RNA5SP34-201ENST00000516887 130 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC021678.3-201ENST00000517893 476 ntBASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.97□□□□□ -1.45
EBF3Q9H4W6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms