Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 USP24P1-201ENST00000433802 779 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL663074.2-201ENST00000440621 479 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RPS10P18-201ENST00000442662 495 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL603882.1-201ENST00000463059 681 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RN7SL188P-201ENST00000469842 285 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC037198.2-201ENST00000478845 733 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RNA5SP271-201ENST00000516700 88 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 snoU109.6-201ENST00000516831 118 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 MTND2P7-201ENST00000521337 640 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL356801.1-201ENST00000559320 294 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC084373.1-201ENST00000603311 235 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC093388.1-201ENST00000609166 430 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL096712.1-201ENST00000614561 159 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL356274.1-201ENST00000617064 410 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 FO681491.1-202ENST00000623392 737 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC022400.9-201ENST00000623633 273 ntBASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
NUP54Q7Z3B4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC022164.1-201ENST00000568767 2673 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OR51C1P-202ENST00000641159 1444 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 RNU6-618P-201ENST00000363518 112 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL512504.1-201ENST00000415494 778 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 MRPS21P2-201ENST00000424704 264 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC002069.1-201ENST00000429649 1159 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 RPS3AP38-201ENST00000435889 763 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 NDUFS5P5-201ENST00000437256 321 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 PCNPP2-201ENST00000441651 455 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL157884.3-201ENST00000448273 1184 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OSTCP1-201ENST00000455507 450 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC094085.1-201ENST00000468914 584 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC117394.1-201ENST00000477323 567 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 PDCL3P4-201ENST00000489621 720 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 RN7SL57P-201ENST00000493687 290 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL671862.1-201ENST00000515851 349 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OR7E10P-201ENST00000526420 991 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 OR51C1P-201ENST00000608504 942 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AL365181.4-201ENST00000609800 547 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 AC092159.4-201ENST00000624944 550 ntBASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
NUP54Q7Z3B4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms