Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
H2afb3S4R1G7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
H2afb3S4R1G7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
H2afb3S4R1G7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm24841-201ENSMUST00000158676 357 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm37856-201ENSMUST00000191634 999 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm43183-201ENSMUST00000200632 547 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H2afb3S4R1G7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.15■□□□□ 0.02
H2afb3S4R1G7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Gm15378-201ENSMUST00000121894 207 ntBASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.14■□□□□ 0.01
H2afb3S4R1G7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H2afb3S4R1G7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms