Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
H2afb1S4R1E0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.3■□□□□ 0.04
H2afb1S4R1E0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Gm18025-201ENSMUST00000221733 862 ntBASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
H2afb1S4R1E0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
H2afb1S4R1E0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.28■□□□□ 0.04
H2afb1S4R1E0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Gm18666-201ENSMUST00000190039 958 ntBASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
H2afb1S4R1E0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms