Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cr1Q9Z0D9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cx3cr1Q9Z0D9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm6576-201ENSMUST00000169678 883 ntBASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cx3cr1Q9Z0D9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cx3cr1Q9Z0D9 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cx3cr1Q9Z0D9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms