Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col13a1Q9R1N9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col13a1Q9R1N9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col13a1Q9R1N9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Gm10418-201ENSMUST00000100943 576 ntBASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Gm10052-201ENSMUST00000168019 960 ntBASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Gm7729-201ENSMUST00000050143 801 ntBASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col13a1Q9R1N9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm11594-201ENSMUST00000122313 162 ntBASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm18195-201ENSMUST00000207604 706 ntBASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Gm9731-201ENSMUST00000209480 747 ntBASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col13a1Q9R1N9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms