Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tubd1Q9R1K7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Gm27389-201ENSMUST00000183622 195 ntBASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Gm18101-201ENSMUST00000215769 548 ntBASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.11■□□□□ 0.33
Tubd1Q9R1K7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Gm29707-201ENSMUST00000196325 491 ntBASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tubd1Q9R1K7 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tubd1Q9R1K7 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tubd1Q9R1K7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tubd1Q9R1K7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tubd1Q9R1K7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms