Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RpgrQ9R0X5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RpgrQ9R0X5 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RpgrQ9R0X5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Idnk-204ENSMUST00000226010 1898 ntBASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Gm4974-201ENSMUST00000209974 875 ntBASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RpgrQ9R0X5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RpgrQ9R0X5 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RpgrQ9R0X5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RpgrQ9R0X5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RpgrQ9R0X5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms