Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rnf4Q9QZS2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rnf4Q9QZS2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf4Q9QZS2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Rnf4Q9QZS2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf4Q9QZS2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms